Edwin V. Bonilla
Senior Principal Research Scientist, CSIRO.
edwin.bonilla [at] csiro.au
“It’s not [only] the consequence that makes a problem important, it is that you have a reasonable attack.”
Richard Hamming, 1986.
I have been working on machine learning for 20+ years and currently lead Foundational Machine Learning at CSIRO, where my focus is on making probabilistic machine learning a fundamental part of decision-making, under uncertainty, at scale, and grounded in causal understanding.
That’s meant building things, not just publishing about them: I pioneered multi-task Gaussian process methods now widely used for transfer learning under uncertainty; co-created Arrow, one of the first foundation models for causal discovery; and built platforms like AutoGP (scalable Gaussian process modelling) and VGCN (graph-structure learning) that turned research into reusable infrastructure. I also led the ML system behind Milepost GCC, the first machine-learning-driven optimising compiler, still cited today as test-of-time work.
At CSIRO I lead a team of researchers and engineers, set technical strategy for causal AI, generative AI, and decision intelligence, building on transformer and LLM-based foundations, and translated that work into real solutions across renewable energy, climate systems, aerospace, and education.
I’ve taken a research capability from zero to organisational strategy, and I care about doing that kind of work at scale.
My work is published regularly at NeurIPS, ICML and ICLR (6,000+ citations, a recent ICML oral, two test-of-time awards, a NeurIPS Graph Representational Learning Workshop Outstanding Contribution Award).
news
| Aug 04, 2026 | A Foundational Model for Causal Discovery |
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| Aug 04, 2026 | 3 x papers at NeurIPS 2025 |
| Aug 04, 2026 | 2 x papers at ICML 2025 |
| Aug 04, 2026 | Generative Bayesian Optimization (GenBO) at ICLR 2026 |
| Jun 25, 2024 | DAG Estimation at ICML 2024 |
latest posts
highlighted publications
- Contextual directed acyclic graphsIn International Conference on Artificial Intelligence and Statistics (AISTATS) , 2024
- Variational DAG Estimation via State Augmentation With Stochastic PermutationsarXiv preprint arXiv:2402.02644, 2024
- Optimal Transport for Structure Learning Under Missing DataAccepted for publication at International Conference on Machine Learning (ICML), 2024
- ProDAG: Projection-induced variational inference for directed acyclic graphsarXiv preprint arXiv:2405.15167, 2024
- Parameter Estimation in DAGs from Incomplete Data via Optimal TransportIn Accepted for publication at International Conference on Machine Learning (ICML) , 2024